HIV Target gene Detail Information

> LSM14A Gene Search Result

Gene Information

Gene Name	LSM14A
Gene ID	26065
Gene Full Name	LSM14A, mRNA processing body assembly factor
Gene Alias	RAP55; FAM61A; RAP55A; C19orf13
Transcripts	ENSG00000262860
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytoplasmic bodies;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8ND56
HGNC ID	HGNC:24489
VEGA ID	OTTHUMG00000178062
OMIM ID	610677
String ID	9606.ENSP00000446271
PharmGKB ID	PA134989467

Target gene [LSM14A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000732	chr19	112	89	107	308	View
4000940	chr19	99	67	77	243	View
4006049	chr19	10	13	4	27	View
4006569	chr19	3	17	4	24	View
4008490	chr19	13	2		15	View
4012470	chr19	3	1	1	5	View
4100027	chr19	64	2		66	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).