EBV Target gene Detail Information

> LRRK1 Gene Search Result


Gene Information
Gene Name LRRK1
Gene ID 79705
Gene Full Name leucine rich repeat kinase 1
Gene Alias RIPK6; Roco1
Transcripts ENSG00000154237
Virus EBV
Gene Type protein coding
HPA Location Info Cytosol;Mitochondria;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q38SD2
HGNC ID HGNC:18608
VEGA ID OTTHUMG00000165514
OMIM ID 610986
String ID 9606.ENSP00000373600
PharmGKB ID PA134892363
Target gene [LRRK1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000164 chr15 90 1 91 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).