HTLV1 Target gene Detail Information

> LRRC66 Gene Search Result

Gene Information

Gene Name	LRRC66
Gene ID	339977
Gene Full Name	leucine rich repeat containing 66
Transcripts	ENSG00000188993
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q68CR7
HGNC ID	HGNC:34299
VEGA ID	OTTHUMG00000160623
String ID	9606.ENSP00000341944
PharmGKB ID	PA162394587

Target gene [LRRC66] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6011400	chr4	25		1	26	View
6016877	chr4	10	1		11	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of LRRC66 expression and immune infiltrating cell level correlation result in HTLV1+ samples
LRRC66 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).