HBV Target gene Detail Information

> LRRC57 Gene Search Result

Gene Information

Gene Name	LRRC57
Gene ID	255252
Gene Full Name	leucine rich repeat containing 57
Transcripts	ENSG00000180979
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Mitochondria;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8N9N7
HGNC ID	HGNC:26719
VEGA ID	OTTHUMG00000130679
String ID	9606.ENSP00000326817
PharmGKB ID	PA142671516

Target gene [LRRC57] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1003794	chr15	109			109	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of LRRC57 expression and immune infiltrating cell level correlation result in HBV+ samples
LRRC57 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).