HTLV1 Target gene Detail Information

> LRRC4C Gene Search Result

Gene Information

Gene Name	LRRC4C
Gene ID	57689
Gene Full Name	leucine rich repeat containing 4C
Gene Alias	NGL1; NGL-1
Transcripts	ENSG00000148948
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9HCJ2
HGNC ID	HGNC:29317
VEGA ID	OTTHUMG00000166383
OMIM ID	608817
String ID	9606.ENSP00000278198
PharmGKB ID	PA142671534

Target gene [LRRC4C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6003699	chr11	122	20	4	146	View
6003714	chr11	122	19	4	145	View
6003985	chr11	33	20	80	133	View
6004705	chr11	86	18	3	107	View
6014465	chr11	16			16	View
6018652	chr11	7	2		9	View
6020164	chr11	7			7	View
6020849	chr11		6		6	View
6023767	chr11	1	3		4	View
6024337	chr11	2	1		3	View
6025585	chr11	3			3	View
6028056	chr11	1			1	View
6028666	chr11		1		1	View
6029180	chr11	1			1	View
6029388	chr11	1			1	View
6029389	chr11	1			1	View
6030200	chr11		1		1	View
6030584	chr11				0	View
6030901	chr11				0	View
6031166	chr11				0	View
6031174	chr11				0	View
6031816	chr11				0	View
6032924	chr11				0	View
6033432	chr11				0	View
6033575	chr11				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).