HBV Target gene Detail Information

> LRP8 Gene Search Result


Gene Information
Gene Name LRP8
Gene ID 7804
Gene Full Name LDL receptor related protein 8
Gene Alias MCI1; LRP-8; APOER2; HSZ75190
Transcripts ENSG00000157193
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID Q14114
HGNC ID HGNC:6700
VEGA ID OTTHUMG00000008924
OMIM ID 602600
String ID 9606.ENSP00000303634
PharmGKB ID PA30457
Target gene [LRP8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015808 chr1 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of LRP8 expression and immune infiltrating cell level correlation result in HBV+ samples
LRP8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).