HBV Target gene Detail Information

> LRP2 Gene Search Result


Gene Information
Gene Name LRP2
Gene ID 4036
Gene Full Name LDL receptor related protein 2
Gene Alias DBS; GP330; LRP-2
Transcripts ENSG00000081479
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID P98164
HGNC ID HGNC:6694
VEGA ID OTTHUMG00000132179
OMIM ID 600073
String ID 9606.ENSP00000263816
Drugbank ID BE0000942
PharmGKB ID PA30452
Target gene [LRP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002216 chr2 230 79 4 313 View
1002248 chr2 217 85 4 306 View
1002898 chr2 12 128 53 193 View
1402728 chr2 230 79 4 313 View
1402729 chr2 217 85 4 306 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of LRP2 expression and immune infiltrating cell level correlation result in HBV+ samples
LRP2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).