HIV Target gene Detail Information

> LRCH2 Gene Search Result


Gene Information
Gene Name LRCH2
Gene ID 57631
Gene Full Name leucine rich repeats and calponin homology domain containing 2
Gene Alias dA204F4.4
Transcripts ENSG00000130224
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoli;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5VUJ6
HGNC ID HGNC:29292
VEGA ID OTTHUMG00000022233
String ID 9606.ENSP00000325091
PharmGKB ID PA134890613
Target gene [LRCH2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4013068 chrX 2 2 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).