HBV Target gene Detail Information

> LOC643441 Gene Search Result

Gene Information

Gene Name	LOC643441
Gene ID	643441
Gene Full Name	uncharacterized LOC643441
Virus	HBV
Gene Type	ncRNA

Target gene [LOC643441] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1400101	chr1	1	1		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE114783 (GEO)	Chronic HBV (CHB) infection	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Hepatocellular carcinoma	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Liver cirrhosis	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)

> Dataset: GSE114783
HeatMap of cell type fractions in all samples	Lollipop of LOC643441 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
LOC643441 expression: Low -> High
Lollipop of LOC643441 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples	Lollipop of LOC643441 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).