HBV Target gene Detail Information

> LOC388572 Gene Search Result

Gene Information

Gene Name	LOC388572
Gene ID	388572
Gene Full Name	uncharacterized LOC388572
Virus	HBV
Gene Type	ncRNA

Target gene [LOC388572] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1002631	chr11	7	228		235	View
1002740	chr11	44	73	95	212	View
1002830	chr11	45	61	95	201	View
1003804	chr11	37	53	18	108	View
1004677	chr11	36	35	1	72	View
1004905	chr11	35	30	1	66	View
1004908	chr11	35	30	1	66	View
1006615	chr11	14	21	1	36	View
1011603	chr11	6	1	1	8	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE114783 (GEO)	Chronic HBV (CHB) infection	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Hepatocellular carcinoma	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Liver cirrhosis	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)

> Dataset: GSE114783
HeatMap of cell type fractions in all samples	Lollipop of LOC388572 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
LOC388572 expression: Low -> High
Lollipop of LOC388572 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples	Lollipop of LOC388572 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).