EBV Target gene Detail Information

> LOC101928135 Gene Search Result


Gene Information
Gene Name LOC101928135
Gene ID 101928135
Gene Full Name uncharacterized LOC101928135
Virus EBV
Gene Type ncRNA
Target gene [LOC101928135] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000491 chr3 14 1 15 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE42867 (GEO) Burkitt lymphoma 12 Burkitt lymphoma cell line Awia (EBV+)(12)
GSE12452 (GEO) Nasopharyngeal carcinoma 41 Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE42867

HeatMap of cell type fractions in all samples Lollipop of LOC101928135 expression and immune infiltrating cell level correlation result in EBV+ samples
LOC101928135 expression: Low -> High

> Dataset: GSE12452

HeatMap of cell type fractions in all samples Lollipop of LOC101928135 expression and immune infiltrating cell level correlation result in EBV+ samples
LOC101928135 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).