EBV Target gene Detail Information

> LOC100506403 Gene Search Result


Gene Information
Gene Name LOC100506403
Gene ID 100506403
Gene Full Name uncharacterized LOC100506403
Transcripts ENSG00000159216
Virus EBV
Gene Type ncRNA
HPA Location Info
Target gene [LOC100506403] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000389 chr21 18 2 4 24 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of LOC100506403 expression and immune infiltrating cell level correlation result in EBV+ samples
LOC100506403 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).