HIV Target gene Detail Information

> LOC100288798 Gene Search Result

Gene Information

Gene Name	LOC100288798
Gene ID	100288798
Gene Full Name	uncharacterized LOC100288798
Virus	HIV
Gene Type	ncRNA

Target gene [LOC100288798] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009717	chr12	2	7	2	11	View
4011875	chr12	5		1	6	View
4015505	chr12	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of LOC100288798 expression and immune infiltrating cell level correlation result in HIV+ samples
LOC100288798 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).