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EBV Target gene Detail Information

> LOC100132154 Gene Search Result


Gene Information
Gene Name LOC100132154
Gene ID 100132154
Gene Full Name ankyrin repeat domain 30B pseudogene
Virus EBV
Gene Type pseudo
Target gene [LOC100132154] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000121 chr14 103 35 1 139 View
3000154 chr14 78 25 103 View
3000192 chr14 65 12 1 78 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE45919 (GEO) Infectious mononucleosis 24 Infectious mononucleosis (IM)(EBV+)(3), Normal (9), Latent EBV (12)
GSE58240 (GEO) Multiple sclerosis 32 Multiple sclerosis IFN-β treated (EBV+)(16), Multiple sclerosis untreated (EBV+)(16)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of LOC100132154 expression and immune infiltrating cell level correlation result in EBV+ samples
LOC100132154 expression: Low -> High

> Dataset: GSE45919

HeatMap of cell type fractions in all samples Lollipop of LOC100132154 expression and immune infiltrating cell level correlation result in EBV+ samples
LOC100132154 expression: Low -> High

> Dataset: GSE58240

HeatMap of cell type fractions in all samples Lollipop of LOC100132154 expression and immune infiltrating cell level correlation result in EBV+ samples
LOC100132154 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).