HPV Target gene Detail Information

> LMX1B Gene Search Result

Gene Information

Gene Name	LMX1B
Gene ID	4010
Gene Full Name	LIM homeobox transcription factor 1 beta
Gene Alias	NPS1; LMX1.2
Transcripts	ENSG00000136944
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins, Transcription factors
Gene Function	Oncogene
Uniport_ID	O60663
HGNC ID	HGNC:6654
VEGA ID	OTTHUMG00000020692
OMIM ID	602575
String ID	9606.ENSP00000347684
PharmGKB ID	PA30417

Target gene [LMX1B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5404829	chr9	26	14		40	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).