HPV Target gene Detail Information

> LMX1A Gene Search Result


Gene Information
Gene Name LMX1A
Gene ID 4009
Gene Full Name LIM homeobox transcription factor 1 alpha
Gene Alias LMX1; LMX1.1
Transcripts ENSG00000162761
Virus HPV
Gene Type protein coding
HPA Location Info Golgi apparatus;Nucleoplasm;Vesicles;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q8TE12
HGNC ID HGNC:6653
VEGA ID OTTHUMG00000034575
OMIM ID 600298
String ID 9606.ENSP00000340226
PharmGKB ID PA30416
Target gene [LMX1A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200814 chr1 4 2 6 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).