HBV Target gene Detail Information

> LMO3 Gene Search Result

Gene Information

Gene Name	LMO3
Gene ID	55885
Gene Full Name	LIM domain only 3
Gene Alias	RBTN3; RHOM3; RBTNL2; Rhom-3
Transcripts	ENSG00000048540
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Gene Function	Oncogene
Uniport_ID	Q8TAP4
HGNC ID	HGNC:6643
VEGA ID	OTTHUMG00000168837
OMIM ID	180386
String ID	9606.ENSP00000442786
PharmGKB ID	PA30409

Target gene [LMO3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1011804	chr12	3	1	4	8	View
1012789	chr12	3		3	6	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of LMO3 expression and immune infiltrating cell level correlation result in HBV+ samples
LMO3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).