HBV Target gene Detail Information

> LMO1 Gene Search Result


Gene Information
Gene Name LMO1
Gene ID 4004
Gene Full Name LIM domain only 1
Gene Alias TTG1; RBTN1; RHOM1
Transcripts ENSG00000166407
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Disease related genes, Predicted intracellular proteins
Gene Function Oncogene
Uniport_ID P25800
HGNC ID HGNC:6641
VEGA ID OTTHUMG00000165833
OMIM ID 186921
String ID 9606.ENSP00000338207
PharmGKB ID PA30407
Target gene [LMO1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008832 chr7 13 5 1 19 View
1009629 chr7 3 3 9 15 View
1010453 chr11 11 1 12 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).