HIV Target gene Detail Information

> LLGL2 Gene Search Result

Gene Information

Gene Name	LLGL2
Gene ID	3993
Gene Full Name	LLGL2, scribble cell polarity complex component
Gene Alias	HGL; LGL2; Hugl-2
Transcripts	ENSG00000073350
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Vesicles;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q6P1M3
HGNC ID	HGNC:6629
VEGA ID	OTTHUMG00000179685
OMIM ID	618483
String ID	9606.ENSP00000376333
PharmGKB ID	PA30397

Target gene [LLGL2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009333	chr17	4	8		12	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of LLGL2 expression and immune infiltrating cell level correlation result in HIV+ samples
LLGL2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).