HIV Target gene Detail Information

> LIPE-AS1 Gene Search Result

Gene Information

Gene Name	LIPE-AS1
Gene ID	100996307
Transcripts	ENSG00000213904
Virus	HIV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:48589
lncRNASNP2 ID	NONHSAG025906.2

Target gene [LIPE-AS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001290	chr19	96	75	11	182	View
4001379	chr19	91	71	9	171	View
4005621	chr19	15	5	11	31	View
4007200	chr19	16	1	3	20	View
4012099	chr19	5			5	View
4013648	chr19	3			3	View
4014414	chr19	2			2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of LIPE-AS1 expression and immune infiltrating cell level correlation result in HIV+ samples
LIPE-AS1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).