HBV Target gene Detail Information

> LIPA Gene Search Result


Gene Information
Gene Name LIPA
Gene ID 3988
Gene Full Name lipase A, lysosomal acid type
Gene Alias LAL; CESD
Transcripts ENSG00000107798
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Vesicles;Nucleoli fibrillar center;Nucleoplasm;
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID P38571
HGNC ID HGNC:6617
VEGA ID OTTHUMG00000018716
OMIM ID 613497
String ID 9606.ENSP00000337354
Drugbank ID BE0003764
PharmGKB ID PA30391
Target gene [LIPA] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001156 chr10 737 80 168 985 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of LIPA expression and immune infiltrating cell level correlation result in HBV+ samples
LIPA expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).