HTLV1 Target gene Detail Information

> LINGO2 Gene Search Result

Gene Information

Gene Name	LINGO2
Gene ID	158038
Gene Full Name	leucine rich repeat and Ig domain containing 2
Gene Alias	LERN3; LRRN6C
Transcripts	ENSG00000174482
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q7L985
HGNC ID	HGNC:21207
VEGA ID	OTTHUMG00000019721
OMIM ID	609793
String ID	9606.ENSP00000369328
PharmGKB ID	PA162394096

Target gene [LINGO2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6015484	chr9	4	10		14	View
6016604	chr9	5	7		12	View
6018269	chr9	7	2		9	View
6022419	chr9		3	2	5	View
6023298	chr9	4			4	View
6023476	chr9	4			4	View
6024550	chr9	3			3	View
6025055	chr9	3			3	View
6027184	chr9	2			2	View
6027185	chr9	2			2	View
6028800	chr9	1			1	View
6028825	chr9			1	1	View
6029027	chr9	1			1	View
6031877	chr9				0	View
6032290	chr9				0	View
6032554	chr9				0	View
6032555	chr9				0	View
6033026	chr9				0	View
6033300	chr9				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).