HPV Target gene Detail Information

> LINC02425 Gene Search Result

Gene Information

Gene Name	LINC02425
Gene ID	105369810
Gene Full Name	long intergenic non-protein coding RNA 2425
Transcripts	ENSG00000256259
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:53356

Target gene [LINC02425] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5402569	chr12	29	35	3	67	View
5402980	chr12	24	29	3	56	View
5402984	chr12	24	29	3	56	View
5403381	chr12	24	29	3	56	View
5403438	chr12	24	29	3	56	View
5403439	chr12	29	35	3	67	View
5403494	chr12	24	29	3	56	View
5403495	chr12	29	35	3	67	View
5403505	chr12	24	29	3	56	View
5404302	chr12	24	29	3	56	View
5404325	chr12	24	29	3	56	View
5404484	chr12	24	29	3	56	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).