HPV Target gene Detail Information

> LINC01683 Gene Search Result

Gene Information

Gene Name	LINC01683
Gene ID	105372746
Gene Alias	C21orf40
Transcripts	ENSG00000233480
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:52471

Target gene [LINC01683] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5200221	chr21	3	1		4	View
5200540	chr21				0	View
5200706	chr21		3	3	6	View
5201391	chr21		2	6	8	View
5403017	chr21				0	View
5403183	chr21	9	1	7	17	View
5403276	chr21	12			12	View
5403372	chr21	3			3	View
5404440	chr21	1			1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).