HPV Target gene Detail Information

> LINC01242 Gene Search Result

Gene Information

Gene Name	LINC01242
Gene ID	401497
Virus	HPV
Gene Type	ncRNA
HGNC ID	HGNC:49810
VEGA ID	OTTHUMG00000189587
lncRNASNP2 ID	NONHSAG051979.2

Target gene [LINC01242] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5200182	chr9	125	21	6	152	View
5200304	chr9	137	19	36	192	View
5200749	chr9	5	12		17	View
5201039	chr9				0	View
5403410	chr9	3	1		4	View
5403412	chr9	10	10		20	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).