HIV Target gene Detail Information

> LINC01138 Gene Search Result


Gene Information
Gene Name LINC01138
Gene ID 388685
Gene Alias LINC00875
Transcripts ENSG00000274020
Virus HIV
Gene Type ncRNA
HPA Location Info
HGNC ID HGNC:49454
VEGA ID OTTHUMG00000185296
lncRNASNP2 ID NONHSAG058112.1
Target gene [LINC01138] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4011862 chr1 5 1 6 View
4016120 chr1 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).