HTLV1 Target gene Detail Information

> LINC01088 Gene Search Result

Gene Information

Gene Name	LINC01088
Gene ID	100505875
Transcripts	ENSG00000249307
Virus	HTLV1
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:49148
lncRNASNP2 ID	NONHSAG038292.2

Target gene [LINC01088] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6002852	chr4	176	26	2	204	View
6003308	chr4	112	55	1	168	View
6016345	chr4	12			12	View
6017889	chr4		10		10	View
6018373	chr4	6	3		9	View
6025031	chr4	3			3	View
6026308	chr4	1	1		2	View
6030671	chr4				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).