HPV Target gene Detail Information

> LINC00879 Gene Search Result


Gene Information
Gene Name LINC00879
Gene ID 255025
Transcripts ENSG00000239589
Virus HPV
Gene Type ncRNA
HPA Location Info
HGNC ID HGNC:48566
lncRNASNP2 ID NONHSAG035536.2
Target gene [LINC00879] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5003243 chr3 3 1 4 View
5402404 chr3 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).