HIV Target gene Detail Information

> LINC00649 Gene Search Result

Gene Information

Gene Name	LINC00649
Gene ID	100506334
Gene Alias	LINC00650; lnc-ITSN1-2
Transcripts	ENSG00000237945
Virus	HIV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:44305
VEGA ID	OTTHUMG00000065819
lncRNASNP2 ID	NONHSAG032726.2

Target gene [LINC00649] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004101	chr21	19	22	8	49	View
4005742	chr21	30			30	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).