HTLV1 Target gene Detail Information

> LINC00578 Gene Search Result

Gene Information

Gene Name	LINC00578
Gene ID	100505566
Transcripts	ENSG00000228221
Virus	HTLV1
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:43807
lncRNASNP2 ID	NONHSAG036724.2

Target gene [LINC00578] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6000909	chr3	278	165	278	721	View
6001520	chr3	39	193	179	411	View
6001609	chr3	24	240	122	386	View
6008552	chr3	33	11		44	View
6010064	chr3		18	15	33	View
6029103	chr3		1		1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).