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HPV Target gene Detail Information

> LINC00486 Gene Search Result


Gene Information
Gene Name LINC00486
Gene ID 285045
Transcripts ENSG00000230876
Virus HPV
Gene Type ncRNA
HPA Location Info
HGNC ID HGNC:42946
lncRNASNP2 ID NONHSAG027432.2
Target gene [LINC00486] related to VISs
DVIDChromosomeHMTFBSCASum of Overlapped RecordsDetail
5000002 chr2 3854 4056 753 8663 View
5000003 chr2 3864 4058 753 8675 View
5000004 chr2 3864 4058 753 8675 View
5000005 chr2 3864 4058 753 8675 View
5000006 chr2 3864 4058 753 8675 View
5000007 chr2 3864 4058 753 8675 View
5000008 chr2 3864 4058 753 8675 View
5000009 chr2 3864 4058 753 8675 View
5000010 chr2 3864 4058 753 8675 View
5000011 chr2 3864 4058 753 8675 View
Showing 1 to 10 of 43 entries
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Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).