HPV Target gene Detail Information

> LINC00474 Gene Search Result

Gene Information

Gene Name	LINC00474
Gene ID	58483
Gene Alias	C9orf27; EST-YD1
Transcripts	ENSG00000204148
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:23367
lncRNASNP2 ID	NONHSAG053292.2
PharmGKB ID	PA134935304

Target gene [LINC00474] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001459	chr9	3	30		33	View
5201795	chr9	2			2	View
5403555	chr9	1		1	2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).