HPV Target gene Detail Information

> LINC00473 Gene Search Result

Gene Information

Gene Name	LINC00473
Gene ID	90632
Gene Alias	LNC473; C6orf176; bA142J11.1
Transcripts	ENSG00000112541
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:21160
VEGA ID	OTTHUMG00000015990
lncRNASNP2 ID	NONHSAG045383.2
PharmGKB ID	PA134889928

Target gene [LINC00473] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5201964	chr6	119	10		129	View
5403841	chr6	5	1		6	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).