EBV Target gene Detail Information

> LINC00469 Gene Search Result

Gene Information

Gene Name	LINC00469
Gene ID	283982
Gene Alias	C17orf54
Virus	EBV
Gene Type	ncRNA
HGNC ID	HGNC:26863
VEGA ID	OTTHUMG00000167833
lncRNASNP2 ID	NONHSAG022681.2
PharmGKB ID	PA142672237

Target gene [LINC00469] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
3000090	chr17	189	5	8	202	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE102203 (GEO)	B-cell lymphoma	9	Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE85599 (GEO)	Infectious mononucleosis	17	Chronic active EBV infection (EBV+)(5), Acute infectious mononucleosis (EBV+)(6), Normal (6)

> Dataset: GSE102203
HeatMap of cell type fractions in all samples	Lollipop of LINC00469 expression and immune infiltrating cell level correlation result in EBV+ samples
LINC00469 expression: Low -> High

> Dataset: GSE85599
HeatMap of cell type fractions in all samples	Lollipop of LINC00469 expression and immune infiltrating cell level correlation result in EBV+ samples
LINC00469 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).