HPV Target gene Detail Information

> LINC00392 Gene Search Result

Gene Information

Gene Name	LINC00392
Gene ID	100874155
Virus	HPV
Gene Type	ncRNA
HGNC ID	HGNC:42720
lncRNASNP2 ID	NONHSAG013763.2

Target gene [LINC00392] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5200029	chr13	1	1	1	3	View
5200044	chr13	9	5		14	View
5201237	chr13	19	2		21	View
5201904	chr13	9	5		14	View
5201920	chr13	9	5		14	View
5402988	chr13	7			7	View
5404892	chr13	7	4		11	View
5404918	chr13	7	4		11	View
5404927	chr13	5	25	2	32	View
5404987	chr13	5	12	1	18	View
5404990	chr13	5	26	2	33	View
5404991	chr13	5	13	1	19	View
5404992	chr13	5	12	1	18	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of LINC00392 expression and immune infiltrating cell level correlation result in HPV+ samples
LINC00392 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).