HIV Target gene Detail Information

> LINC00309 Gene Search Result

Gene Information

Gene Name	LINC00309
Gene ID	150992
Gene Alias	NCRNA00309
Transcripts	ENSG00000230923
Virus	HIV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:25279
lncRNASNP2 ID	NONHSAG027952.2

Target gene [LINC00309] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002256	chr2	52	18	33	103	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of LINC00309 expression and immune infiltrating cell level correlation result in HIV+ samples
LINC00309 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).