HPV Target gene Detail Information

> LINC00308 Gene Search Result

Gene Information

Gene Name	LINC00308
Gene ID	54143
Gene Alias	PRED16; C21orf74; NCRNA00308
Transcripts	ENSG00000184856
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:16023
VEGA ID	OTTHUMG00000175277
lncRNASNP2 ID	NONHSAG032504.2
PharmGKB ID	PA142672214

Target gene [LINC00308] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5201913	chr21	1			1	View
5403067	chr21				0	View
5403289	chr21	8	3		11	View
5403290	chr21		2		2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).