HTLV1 Target gene Detail Information

> LINC00299 Gene Search Result

Gene Information

Gene Name	LINC00299
Gene ID	339789
Gene Alias	C2orf46; NCRNA00299
Transcripts	ENSG00000236790
Virus	HTLV1
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:27940
VEGA ID	OTTHUMG00000112455
lncRNASNP2 ID	NONHSAG026925.2
PharmGKB ID	PA165696372

Target gene [LINC00299] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6002513	chr2	216	10	10	236	View
6010019	chr2	1	5	27	33	View
6012792	chr2	21			21	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).