HIV Target gene Detail Information

> LINC-PINT Gene Search Result

Gene Information

Gene Name	LINC-PINT
Gene ID	378805
Gene Alias	PINT; MKLN1-AS1; LincRNA-Pint
Transcripts	ENSG00000231721
Virus	HIV
Gene Type	ncRNA
HPA Location Info
Gene Function	Suppressor gene
HGNC ID	HGNC:26885
VEGA ID	OTTHUMG00000155000
OMIM ID	618212
lncRNASNP2 ID	NONHSAG048820.2

Target gene [LINC-PINT] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002556	chr7	52	22	15	89	View
4004568	chr7	29	13		42	View
4006256	chr7	22	4		26	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of LINC-PINT expression and immune infiltrating cell level correlation result in HIV+ samples
LINC-PINT expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).