HTLV1 Target gene Detail Information

> LIMS1 Gene Search Result

Gene Information

Gene Name	LIMS1
Gene ID	3987
Gene Full Name	LIM zinc finger domain containing 1
Gene Alias	PINCH; PINCH1; PINCH-1
Transcripts	ENSG00000169756
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;Focal adhesion sites;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	P48059
HGNC ID	HGNC:6616
VEGA ID	OTTHUMG00000130983
OMIM ID	602567
String ID	9606.ENSP00000446121
PharmGKB ID	PA30389

Target gene [LIMS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6008728	chr2	33	1	8	42	View
6008731	chr2	33	1	8	42	View
6009645	chr2	30	5		35	View
6010190	chr2	5	19	8	32	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).