HPV Target gene Detail Information

> LHX5 Gene Search Result


Gene Information
Gene Name LHX5
Gene ID 64211
Gene Full Name LIM homeobox 5
Transcripts ENSG00000089116
Virus HPV
Gene Type protein coding
HPA Location Info Cytosol;Nuclear bodies;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9H2C1
HGNC ID HGNC:14216
VEGA ID OTTHUMG00000169552
OMIM ID 605992
String ID 9606.ENSP00000261731
PharmGKB ID PA30367
Target gene [LHX5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5400351 chr12 45 8 5 58 View
5400352 chr12 25 7 38 70 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).