HBV Target gene Detail Information

> LGI1 Gene Search Result


Gene Information
Gene Name LGI1
Gene ID 9211
Gene Full Name leucine rich glioma inactivated 1
Gene Alias EPT; ETL1; ADLTE; ADPAEF; ADPEAF; IB1099; EPITEMPIN
Transcripts ENSG00000108231
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Disease related genes, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID O95970
HGNC ID HGNC:6572
VEGA ID OTTHUMG00000018777
OMIM ID 604619
String ID 9606.ENSP00000360472
PharmGKB ID PA30349
Target gene [LGI1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1404836 chr10 8 8 3 19 View
1404857 chr10 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).