HTLV1 Target gene Detail Information

> LETMD1 Gene Search Result


Gene Information
Gene Name LETMD1
Gene ID 25875
Gene Full Name LETM1 domain containing 1
Gene Alias HCCR; HCCR1; HCCR2; HCCR-1; HCCR-2; HCRR-2; SLC55A3; 1110019O13Rik
Transcripts ENSG00000050426
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoli;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Gene Function Oncogene
Uniport_ID Q6P1Q0
HGNC ID HGNC:24241
VEGA ID OTTHUMG00000169538
OMIM ID 619070
String ID 9606.ENSP00000389903
PharmGKB ID PA134914870
Target gene [LETMD1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6018173 chr12 9 9 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).