HIV Target gene Detail Information

> LETM2 Gene Search Result


Gene Information
Gene Name LETM2
Gene ID 137994
Gene Full Name leucine zipper and EF-hand containing transmembrane protein 2
Gene Alias SLC55A2
Transcripts ENSG00000165046
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;Nuclear bodies;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q2VYF4
HGNC ID HGNC:14648
VEGA ID OTTHUMG00000165059
String ID 9606.ENSP00000369291
PharmGKB ID PA134887111
Target gene [LETM2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004987 chr8 25 3 9 37 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).