HTLV1 Target gene Detail Information

> LETM1 Gene Search Result


Gene Information
Gene Name LETM1
Gene ID 3954
Gene Full Name leucine zipper and EF-hand containing transmembrane protein 1
Gene Alias SLC55A1
Transcripts ENSG00000168924
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID O95202
HGNC ID HGNC:6556
VEGA ID OTTHUMG00000121149
OMIM ID 604407
String ID 9606.ENSP00000305653
PharmGKB ID PA30335
Target gene [LETM1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004566 chr4 33 18 61 112 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).