HIV Target gene Detail Information

> LDLR Gene Search Result


Gene Information
Gene Name LDLR
Gene ID 3949
Gene Full Name low density lipoprotein receptor
Gene Alias FH; FHC; LDLCQ2
Transcripts ENSG00000130164
Virus HIV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID P01130
HGNC ID HGNC:6547
VEGA ID OTTHUMG00000171935
OMIM ID 606945
String ID 9606.ENSP00000454071
Drugbank ID BE0000499
PharmGKB ID PA227
Target gene [LDLR] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001973 chr19 54 60 6 120 View
4008463 chr19 15 15 View
4010205 chr19 7 1 1 9 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).