HTLV1 Target gene Detail Information

> LDB2 Gene Search Result

Gene Information

Gene Name	LDB2
Gene ID	9079
Gene Full Name	LIM domain binding 2
Gene Alias	LDB1; CLIM1; LDB-2
Transcripts	ENSG00000169744
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoli;Nucleoplasm;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	O43679
HGNC ID	HGNC:6533
VEGA ID	OTTHUMG00000048212
OMIM ID	603450
String ID	9606.ENSP00000306772
PharmGKB ID	PA30317

Target gene [LDB2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6004632	chr3	102	6	1	109	View
6006653	chr3	25	22	18	65	View
6006654	chr3	25	22	18	65	View
6008682	chr4	15		28	43	View
6010833	chr3	26	3		29	View
6012313	chr4	22	1		23	View
6013199	chr4	6	11	3	20	View
6013675	chr4	10	8		18	View
6017756	chr3	2	4	4	10	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).