HTLV1 Target gene Detail Information

> LDB1 Gene Search Result

Gene Information

Gene Name	LDB1
Gene ID	8861
Gene Full Name	LIM domain binding 1
Gene Alias	NLI; CLIM2; LDB-1; CLIM-2
Transcripts	ENSG00000198728
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q86U70
HGNC ID	HGNC:6532
VEGA ID	OTTHUMG00000018950
OMIM ID	603451
String ID	9606.ENSP00000392466
PharmGKB ID	PA30316

Target gene [LDB1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6004950	chr10	96	4		100	View
6007449	chr10	43	10	2	55	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).