HBV Target gene Detail Information

> LATS2 Gene Search Result


Gene Information
Gene Name LATS2
Gene ID 26524
Gene Full Name large tumor suppressor kinase 2
Gene Alias KPM
Transcripts ENSG00000150457
Virus HBV
Gene Type protein coding
HPA Location Info Centriolar satellite;Cytosol;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID Q9NRM7
HGNC ID HGNC:6515
VEGA ID OTTHUMG00000016531
OMIM ID 604861
String ID 9606.ENSP00000372035
Drug (Cytoscape Annotation) Sunitinib Malate
PharmGKB ID PA30302
Target gene [LATS2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009143 chr13 3 14 17 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of LATS2 expression and immune infiltrating cell level correlation result in HBV+ samples
LATS2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).