HBV Target gene Detail Information

> LARP4 Gene Search Result

Gene Information

Gene Name	LARP4
Gene ID	113251
Gene Full Name	La ribonucleoprotein domain family member 4
Gene Alias	PP13296
Transcripts	ENSG00000161813
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoli fibrillar center;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q71RC2
HGNC ID	HGNC:24320
VEGA ID	OTTHUMG00000163724
OMIM ID	618657
String ID	9606.ENSP00000381490
PharmGKB ID	PA142671566

Target gene [LARP4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1000604	chr12	1378	330	113	1821	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of LARP4 expression and immune infiltrating cell level correlation result in HBV+ samples
LARP4 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).